| Index | Gene Name Primary | Uniprot ID | Protein Name | Gene Name Synonym | PDB codes |
| 1 | MMP1 | P03956 | Interstitial collagenase | CLG | 966c |
| 2 | MMP10 | P09238 | Stromelysin-2 | STMY2 | 1q3a |
| 3 | MMP12 | P39900 | Macrophage metalloelastase | HME | 3f18 1ros 6ela 6ekn 1utt 2woa 1jiz 2w0d 3n2v 3nx7 3lk8 3uvc 5lab 1rmz 4efs 4h76 4h84 6enm |
| 4 | MMP13 | P45452 | Collagenase 3 | | 4jpa 4jp4 5uwk 3i7i 3kry 3elm 1ztq 1xuc 1xud 1xur 1you 2ozr 2pjt 2yig 3i7g 3kec 3kej 3kek 3ljz 3wv1 3wv2 3wv3 3zxh 1cxv 456c 4a7b 4a7b 5b5p 5bpa 5uwl 830c |
| 5 | MMP3 | P08254 | Stromelysin-1 | STMY1 | 1d7x 1bqo 1b8y 1biw 1d5j 1g4k 1usn 3ohl 3oho |
| 6 | MMP7 | P09237 | Matrilysin | MPSL1 PUMP1 | 2y6d 1mmp 1mmq 1mmr |
| 7 | MMP8 | P22894 | Neutrophil collagenase | CLG1 | 3dpf 3dpe 1bzs 1i76 1jj9 1zp5 3dng |
| 8 | MMP9 | P14780 | Matrix metalloproteinase-9 | CLG4B | 4h3x 4wzv 6esm |