| Index | Gene Name Primary | Uniprot ID | Protein Name | Gene Name Synonym | PDB codes |
| 1 | ASH1L | Q9NR48 | Histone-lysine N-methyltransferase ASH1L | KIAA1420 KMT2H | 3ope 4ynm 4ynp 4ypa 4ype 4ypu 6ine |
| 2 | EHMT1 | Q9H9B1 | Histone-lysine N-methyltransferase EHMT1 | EUHMTASE1 GLP KIAA1876 KMT1D | 2igq 2rfi 3fpd 3hna 3mo0 3mo2 3mo5 3swc 4i51 5ttg 5tuz 5v9j 5vsd 5vsf 6mbo 6mbp |
| 3 | EHMT2 | Q96KQ7 | Histone-lysine N-methyltransferase EHMT2 | BAT8 C6orf30 G9A KMT1C NG36 | 2o8j 3k5k 3rjw 4nvq 5jhn 5jin 5jiy 5jj0 5t0k 5t0m 5ttf 5tuy 5v9i 5vsc 5vse |
| 4 | EZH2 | Q15910 | Histone-lysine N-methyltransferase EZH2 | KMT6 | 4mi0 4mi5 4w2r 5hyn 5ij7 5ij8 |
| 5 | KMT2A | Q03164 | Histone-lysine N-methyltransferase 2A | ALL1 CXXC7 HRX HTRX MLL MLL1 TRX1 | 2w5y 2w5z 5f5e 5f6l |
| 6 | KMT2C | Q8NEZ4 | Histone-lysine N-methyltransferase 2C | HALR KIAA1506 MLL3 | 5f59 5f6k |
| 7 | KMT2D | O14686 | Histone-lysine N-methyltransferase 2D | ALR MLL2 MLL4 | 4z4p |
| 8 | KMT2E | Q8IZD2 | Inactive histone-lysine N-methyltransferase 2E | MLL5 | 5ht6 |
| 9 | KMT5A | Q9NQR1 | N-lysine methyltransferase KMT5A | PRSET7 SET07 SET8 SETD8 | 1zkk 2bqz 3f9w 3f9x 3f9y 3f9z 4ij8 5t5g 5teg 5th7 5v2n 5w1y 6boz |
| 10 | KMT5B | Q4FZB7 | Histone-lysine N-methyltransferase KMT5B | SUV420H1 | 3s8p 5cpr 5wbv |
| 11 | KMT5C | Q86Y97 | Histone-lysine N-methyltransferase KMT5C | SUV420H2 | 3rq4 |
| 12 | NSD1 | Q96L73 | Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific | ARA267 KMT3B | 3ooi |
| 13 | NSD2 | O96028 | Histone-lysine N-methyltransferase NSD2 | KIAA1090 MMSET TRX5 WHSC1 | 5lsu |
| 14 | NSD3 | Q9BZ95 | Histone-lysine N-methyltransferase NSD3 | WHSC1L1 | 5upd 6cen |
| 15 | PRDM1 | O75626 | PR domain zinc finger protein 1 | BLIMP1 | 3dal |
| 16 | PRDM10 | Q9NQV6 | PR domain zinc finger protein 10 | KIAA1231 PFM7 TRIS | 3ihx |
| 17 | PRDM11 | Q9NQV5 | PR domain-containing protein 11 | PFM8 | 3ray |
| 18 | PRDM12 | Q9H4Q4 | PR domain zinc finger protein 12 | PFM9 | 3ep0 |
| 19 | PRDM2 | Q13029 | PR domain zinc finger protein 2 | KMT8 RIZ | 2qpw |
| 20 | PRDM4 | Q9UKN5 | PR domain zinc finger protein 4 | PFM1 | 3db5 |
| 21 | PRDM9 | Q9NQV7 | Histone-lysine N-methyltransferase PRDM9 | PFM6 | 4ijd 6nm4 |
| 22 | SETD2 | Q9BYW2 | Histone-lysine N-methyltransferase SETD2 | HIF1 HYPB KIAA1732 KMT3A SET2 | 4fmu 4h12 5jjy 5jlb 5jle 5lss 5lsx 5lsy 5lsz 5lt6 5lt7 5lt8 5v21 5v22 |
| 23 | SETD3 | Q86TU7 | Actin-histidine N-methyltransferase | C14orf154 | 3smt 6ict 6icv 6mbj 6mbk 6mbl 6ox0 6ox1 6ox2 6ox3 6ox4 6ox5 |
| 24 | SETD6 | Q8TBK2 | N-lysine methyltransferase SETD6 | | 3qxy 3rc0 |
| 25 | SETD7 | Q8WTS6 | Histone-lysine N-methyltransferase SETD7 | KIAA1717 KMT7 SET7 SET9 | 1h3i 1mt6 1muf 1n6a 1n6c 1o9s 1xqh 2f69 3cbm 3cbo 3cbp 3m53 3m54 3m55 3m56 3m57 3m58 3m59 3m5a 3os5 3vuz 3vv0 4j7f 4j7i 4j83 4j8o 4jds 4jlg 5ayf 5eg2 5ylt 4e47 |
| 26 | SETMAR | Q53H47 | Histone-lysine N-methyltransferase SETMAR | | 3bo5 |
| 27 | SMYD2 | Q9NRG4 | N-lysine methyltransferase SMYD2 | KMT3C | 3rib 3s7b 3s7d 3s7f 3tg4 3tg5 4o6f 4wuy 4ynd 5arf 5arg 5kjk 5kjl 5kjm 5kjn 5v3h 5wcg 6cbx 6cby 6mon |
| 28 | SMYD3 | Q9H7B4 | Histone-lysine N-methyltransferase SMYD3 | ZMYND1 ZNFN3A1 | 3mek 3oxf 3pdn 3qwp 3ru0 5ccl 5ccm 5ex0 5ex3 5hi7 5hq8 5v37 5xxd 5xxg 5xxj 5yjo 6ijl |
| 29 | SUV39H2 | Q9H5I1 | Histone-lysine N-methyltransferase SUV39H2 | KMT1B | 2r3a 6p0r |