| Index | Ligand Name | Ligand Structure | Gene Name Primary | Protein Name | Uniprot ID | Gene Name Synonym | PDB Codes |
| 1 | rbf | | PYGL | Glycogen phosphorylase, liver form | P06737 | | 1l5r |
| 2 | z57 | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3npa |
| 3 | z16 | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3np7 |
| 4 | z15 | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3s0j |
| 5 | h53 | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 2fet, 2ff5 |
| 6 | f58 | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3zcp |
| 7 | f55 | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 2qn3 |
| 8 | 7ls | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 5mem |
| 9 | 12e | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3mrt |
| 10 | htp | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 1axr |
| 11 | cr1 | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 1fu7 |
| 12 | ntf | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 1ww3 |
| 13 | ox2 | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 1xl0 |
| 14 | 7gp | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 2f3s |
| 15 | dl6 | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 2ffr |
| 16 | g27 | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 2g9r, 2g9u |
| 17 | cpb | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 1c8k, 1e1y, 3ebp |
| 18 | que | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 4mra |
| 19 | 57d | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3ebo |
| 20 | dkx | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3l79 |
| 21 | dkz | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3l7b |
| 22 | dk4 | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3l7c |
| 23 | z2t | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3np9 |
| 24 | gpk | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3syr |
| 25 | gpq | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3t3e |
| 26 | gpu | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3t3g |
| 27 | gpv | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3t3h |
| 28 | gpw | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3t3i |
| 29 | d1f | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 4ej2 |
| 30 | d1i | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 4eke |
| 31 | d1j | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 4eky |
| 32 | d1k | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 4el0 |
| 33 | d1m | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 4el5 |
| 34 | 26r | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 4mi3 |
| 35 | 26v | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 4mi6 |
| 36 | 26w | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 4mi9 |
| 37 | 26y | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 4mic |
| 38 | thm | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3bcu |
| 39 | azz | | PYGM | Glycogen phosphorylase, muscle form | P11217 | | 3bcr |