| Index | Ligand Name | Structure | PDB code | ligand desolvation |
| 1 | 64m | Crystal structure of FMS kinase domain with a small molecular inhibitor, PLX647-OME | 4hw7 | 92.4 |
| 2 | 622 | Crystal structure of fms kinase domain with a small molecular inhibitor, PLX5622 | 6n33 | 91.72 |
| 3 | sti | Crystal structure of FMS kinase domain with a small molecular inhibitor, GLEEVEC | 4r7i | 88 |
| 4 | 5cn | cFMS tyrosine kinase (FGF KID) in complex with an arylamide inhibitor | 2i0y | 87.79 |
| 5 | 6c3 | c-FMS tyrosine kinase in complex with a quinolone inhibitor | 2i0v | 85.69 |
| 6 | 8c5 | cFMS tyrosine kinase in complex with a pyridopyrimidinone inhibitor | 3dpk | 76.66 |
| 7 | krj | cFMS tyrosine kinase in complex with 4-Cyano-1H-imidazole-2-carboxylic acid (2-cyclohex-1-enyl-4-piperidin-4-yl-phenyl)-amide | 3krj | 75.83 |
| 8 | krl | cFMS Tyrosine kinase in complex with 5-Cyano-furan-2-carboxylic acid [4-(4-methyl-piperazin-1-yl)-2-piperidin-1-yl-phenyl]-amide | 3krl | 75.14 |
| 9 | ixh | cFMS tyrosine kinase (tie2 KID) in complex with a pyrimidinopyridone inhibitor | 3bea | 73.54 |
| 10 | bdy | Inhibitor Bound to A DFG-In structure of the Kinase Domain of CSF-1R | 3lcd | 59.68 |