| Index | Ligand Name | Structure | PDB code | ligand desolvation |
| 1 | h0y | Crystal structure of BCL-XL in complex with inhibitor (Compound 3) | 3zln | 88.39 |
| 2 | x8u | Crystal structure of BCL-XL in complex with inhibitor (Compound 6) | 3zlo | 83.69 |
| 3 | x0b | Crystal structure of BCL-XL in complex with inhibitor (WEHI-539) | 3zlr | 83.4 |
| 4 | x0d | Crystal structure of Bcl-xL in complex with benzoylurea compound (39b) | 4c52 | 75.5 |
| 5 | 0q5 | Crystal structure of Bcl-Xl complex with 4-(5-butyl-3-(hydroxymethyl)-1-phenyl-1h-pyrazol-4-yl)-3-(3,4-dihydro-2(1h)-isoquinolinylcarbonyl)-n-((2-(trimethylsilyl)ethyl)sulfonyl)benzamide | 4ehr | 70.62 |
| 6 | b50 | Crystal Structure of Bcl-xL bound to BM501 | 3spf | 52.32 |